Command line: /opt/software/SPAdes/3.15.2-GCC-10.2.0/bin/spades.py	-t	10	-1	/data/mramseylab/Soralis/SoJ22_S79_R1_001.fastq	-2	/data/mramseylab/Soralis/SoJ22_S79_R2_001.fastq	-o	/data/mramseylab/Soralis/spades_out	

System information:
  SPAdes version: 3.15.2
  Python version: 3.8.6
  OS: Linux-2.6.32-696.10.2.el6.x86_64-x86_64-with-glibc2.2.5

Output dir: /data/mramseylab/Soralis/spades_out
Mode: read error correction and assembling
Debug mode is turned OFF

Dataset parameters:
  Standard mode
  For multi-cell/isolate data we recommend to use '--isolate' option; for single-cell MDA data use '--sc'; for metagenomic data use '--meta'; for RNA-Seq use '--rna'.
  Reads:
    Library number: 1, library type: paired-end
      orientation: fr
      left reads: ['/data/mramseylab/Soralis/SoJ22_S79_R1_001.fastq']
      right reads: ['/data/mramseylab/Soralis/SoJ22_S79_R2_001.fastq']
      interlaced reads: not specified
      single reads: not specified
      merged reads: not specified
Read error correction parameters:
  Iterations: 1
  PHRED offset will be auto-detected
  Corrected reads will be compressed
Assembly parameters:
  k: automatic selection based on read length
  Repeat resolution is enabled
  Mismatch careful mode is turned OFF
  MismatchCorrector will be SKIPPED
  Coverage cutoff is turned OFF
Other parameters:
  Dir for temp files: /data/mramseylab/Soralis/spades_out/tmp
  Threads: 10
  Memory limit (in Gb): 125