FastQCFastQC Report
Wed 30 Mar 2022
TP15_S15_R1_001.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameTP15_S15_R1_001.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25150111
Sequences flagged as poor quality0
Sequence length64-76
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGGCCGCATCGATTTTCGTTCGTGAATACATGTTATAATAACTATAACT1100580.43760443045360714No Hit
TGTACAGGCTGAAGGCATGGTAACCATCGTATTCACAGCAGGCTCCAATG618180.2457961318739309No Hit
AGACACATATTGAGAATAGTGATTTTTTTTCGCAATGTATTCAGCTAATT456340.1814465152857576No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)