FastQCFastQC Report
Mon 25 Sep 2023
TP11_S11_L001_R1_001.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameTP11_S11_L001_R1_001.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23599909
Sequences flagged as poor quality0
Sequence length35-76
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGGCCGCATCGATTTTCGTTCGTGAATACATGTTATAATAACTATAACT535260.22680595929416508No Hit
TAAGGGCTTGGATTGTTATGTTTTAATTGTGCATAGCTCGCAAGGGTATT375720.1592040037103533No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)