FastQCFastQC Report
Thu 11 May 2023
TP3_S3_R1_001.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameTP3_S3_R1_001.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23766737
Sequences flagged as poor quality0
Sequence length64-76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGGCCGCATCGATTTTCGTTCGTGAATACATGTTATAATAACTATAACT754820.3175951330634912No Hit
GCGGCCGCATCGATTTTCGTTCGTGGGGGGGGGGGGGGGGGGGGGGGGGG361120.1519434493679128No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)