This is cutadapt 2.8 with Python 3.7.4 Command line parameters: -a C{9} -m 20 -o TP9.trim.fastq TP9.fastq Processing reads on 1 core in single-end mode ... Finished in 1.44 s (17 us/read; 3.55 M reads/minute). === Summary === Total reads processed: 85,017 Reads with adapters: 13,581 (16.0%) Reads that were too short: 1,455 (1.7%) Reads written (passing filters): 83,562 (98.3%) Total basepairs processed: 5,186,037 bp Total written (filtered): 4,887,889 bp (94.3%) === Adapter 1 === Sequence: CCCCCCCCC; Type: regular 3'; Length: 9; Trimmed: 13581 times; Reverse-complemented: 0 times No. of allowed errors: 0-9 bp: 0 Bases preceding removed adapters: A: 45.7% C: 0.0% G: 18.2% T: 36.0% none/other: 0.1% Overview of removed sequences length count expect max.err error counts 3 1197 1328.4 0 1197 4 690 332.1 0 690 5 511 83.0 0 511 6 528 20.8 0 528 7 409 5.2 0 409 8 378 1.3 0 378 9 357 0.3 0 357 10 358 0.3 0 358 11 341 0.3 0 341 12 345 0.3 0 345 13 306 0.3 0 306 14 303 0.3 0 303 15 318 0.3 0 318 16 324 0.3 0 324 17 292 0.3 0 292 18 260 0.3 0 260 19 294 0.3 0 294 20 266 0.3 0 266 21 286 0.3 0 286 22 301 0.3 0 301 23 277 0.3 0 277 24 284 0.3 0 284 25 246 0.3 0 246 26 245 0.3 0 245 27 266 0.3 0 266 28 298 0.3 0 298 29 231 0.3 0 231 30 223 0.3 0 223 31 215 0.3 0 215 32 231 0.3 0 231 33 198 0.3 0 198 34 219 0.3 0 219 35 185 0.3 0 185 36 149 0.3 0 149 37 174 0.3 0 174 38 167 0.3 0 167 39 182 0.3 0 182 40 136 0.3 0 136 41 136 0.3 0 136 42 144 0.3 0 144 43 137 0.3 0 137 44 110 0.3 0 110 45 135 0.3 0 135 46 135 0.3 0 135 47 127 0.3 0 127 48 129 0.3 0 129 49 121 0.3 0 121 50 78 0.3 0 78 51 71 0.3 0 71 52 54 0.3 0 54 53 31 0.3 0 31 54 58 0.3 0 58 55 37 0.3 0 37 56 21 0.3 0 21 57 21 0.3 0 21 58 13 0.3 0 13 59 6 0.3 0 6 60 12 0.3 0 12 61 15 0.3 0 15