This is cutadapt 2.8 with Python 3.7.4 Command line parameters: -a C{9} -m 20 -o TP3.trim.fastq TP3.fastq Processing reads on 1 core in single-end mode ... Finished in 1.33 s (19 us/read; 3.09 M reads/minute). === Summary === Total reads processed: 68,346 Reads with adapters: 6,560 (9.6%) Reads that were too short: 388 (0.6%) Reads written (passing filters): 67,958 (99.4%) Total basepairs processed: 4,169,106 bp Total written (filtered): 4,054,652 bp (97.3%) === Adapter 1 === Sequence: CCCCCCCCC; Type: regular 3'; Length: 9; Trimmed: 6560 times; Reverse-complemented: 0 times No. of allowed errors: 0-9 bp: 0 Bases preceding removed adapters: A: 51.2% C: 0.0% G: 16.8% T: 31.9% none/other: 0.0% Overview of removed sequences length count expect max.err error counts 3 955 1067.9 0 955 4 500 267.0 0 500 5 373 66.7 0 373 6 305 16.7 0 305 7 224 4.2 0 224 8 196 1.0 0 196 9 157 0.3 0 157 10 166 0.3 0 166 11 159 0.3 0 159 12 164 0.3 0 164 13 157 0.3 0 157 14 155 0.3 0 155 15 118 0.3 0 118 16 158 0.3 0 158 17 141 0.3 0 141 18 125 0.3 0 125 19 137 0.3 0 137 20 137 0.3 0 137 21 128 0.3 0 128 22 133 0.3 0 133 23 117 0.3 0 117 24 99 0.3 0 99 25 111 0.3 0 111 26 130 0.3 0 130 27 117 0.3 0 117 28 105 0.3 0 105 29 94 0.3 0 94 30 82 0.3 0 82 31 95 0.3 0 95 32 92 0.3 0 92 33 91 0.3 0 91 34 71 0.3 0 71 35 65 0.3 0 65 36 61 0.3 0 61 37 58 0.3 0 58 38 35 0.3 0 35 39 62 0.3 0 62 40 50 0.3 0 50 41 49 0.3 0 49 42 48 0.3 0 48 43 41 0.3 0 41 44 36 0.3 0 36 45 34 0.3 0 34 46 40 0.3 0 40 47 33 0.3 0 33 48 27 0.3 0 27 49 29 0.3 0 29 50 21 0.3 0 21 51 17 0.3 0 17 52 21 0.3 0 21 53 7 0.3 0 7 54 9 0.3 0 9 55 3 0.3 0 3 56 6 0.3 0 6 57 3 0.3 0 3 58 1 0.3 0 1 59 7 0.3 0 7 60 2 0.3 0 2 61 3 0.3 0 3