This is cutadapt 2.8 with Python 3.7.4 Command line parameters: -a C{9} -m 20 -o TP12.trim.fastq TP12.fastq Processing reads on 1 core in single-end mode ... Finished in 1.25 s (19 us/read; 3.09 M reads/minute). === Summary === Total reads processed: 64,125 Reads with adapters: 6,609 (10.3%) Reads that were too short: 427 (0.7%) Reads written (passing filters): 63,698 (99.3%) Total basepairs processed: 3,911,625 bp Total written (filtered): 3,794,321 bp (97.0%) === Adapter 1 === Sequence: CCCCCCCCC; Type: regular 3'; Length: 9; Trimmed: 6609 times; Reverse-complemented: 0 times No. of allowed errors: 0-9 bp: 0 Bases preceding removed adapters: A: 45.0% C: 0.0% G: 20.1% T: 34.8% none/other: 0.1% Overview of removed sequences length count expect max.err error counts 3 997 1002.0 0 997 4 493 250.5 0 493 5 324 62.6 0 324 6 271 15.7 0 271 7 214 3.9 0 214 8 228 1.0 0 228 9 158 0.2 0 158 10 199 0.2 0 199 11 156 0.2 0 156 12 185 0.2 0 185 13 137 0.2 0 137 14 141 0.2 0 141 15 152 0.2 0 152 16 133 0.2 0 133 17 141 0.2 0 141 18 136 0.2 0 136 19 138 0.2 0 138 20 112 0.2 0 112 21 141 0.2 0 141 22 130 0.2 0 130 23 117 0.2 0 117 24 116 0.2 0 116 25 106 0.2 0 106 26 130 0.2 0 130 27 102 0.2 0 102 28 106 0.2 0 106 29 88 0.2 0 88 30 91 0.2 0 91 31 84 0.2 0 84 32 72 0.2 0 72 33 101 0.2 0 101 34 72 0.2 0 72 35 69 0.2 0 69 36 72 0.2 0 72 37 63 0.2 0 63 38 60 0.2 0 60 39 51 0.2 0 51 40 54 0.2 0 54 41 42 0.2 0 42 42 49 0.2 0 49 43 50 0.2 0 50 44 31 0.2 0 31 45 38 0.2 0 38 46 38 0.2 0 38 47 38 0.2 0 38 48 31 0.2 0 31 49 29 0.2 0 29 50 30 0.2 0 30 51 13 0.2 0 13 52 14 0.2 0 14 53 10 0.2 0 10 54 16 0.2 0 16 55 10 0.2 0 10 56 7 0.2 0 7 57 2 0.2 0 2 58 3 0.2 0 3 59 4 0.2 0 4 60 5 0.2 0 5 61 9 0.2 0 9