#This is a log file of directory moves and modifications for the /data/mramseylab/ folder. This also is a description of the overall inventory and usage.

1. /raw_reads/ are for nextgen sequence file outputs from the sequencers only. They are not meant to be used further for analysis in this folder. 
2. RNASeq - all RNASeq data analysis, manipulations, outputs etc should be in a relevant subdirectory here. 
3. TnSeq - same as RNASeq but for all TnSeq data beyond raw_reads. 
4. 16S - same as preceding but for all 16S analysis data. 
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Log: 
5/23/23 - MR moved /metadata/ into /16S/metadata/ 
5/23/23 - MR moved /Soralis/ into /genomes/Soralis
5/23/23 - MR moved /classifiers/ into /16S/classifiers/
5/23/23 - MR moved /transcriptome_analyses into /RNASeq/transcriptome_analyses/ 
5/23/23 - MR moved /old_studies/ into /16S/MR_old_studies/
5/23/23 - MR moved /alignment/ into /RNAseq/EA21_alignment/
5/23/23 - MR moved /analysis/ into /RNAseq/EA21_analysis/
5/23/23 - MR moved /2021_KLemon into /RNAseq/2021_KLemon/
5/23/23 - MR moved /proc_reads/ into 16S/proc_reads/ 
5/23/23 - MR moved /visualizations/ into 16S/visualizations/ 
5/23/23 - MR created /errata_unsorted/ 
5/23/23 - MR moved /tutorial/ into /errata_unsorted/ 
5/23/23 - MR moved /Rexport/ into /16S/Rexport/ 
5/23/23 - MR moved /mutagenesis/ into /errata_unsorted/ 
5/24/24 - MR made numerous changes to /raw_reads/ creating tar.gz files for older folders no longer in use.