#!/bin/bash
#SBATCH -t 4:00:00
#SBATCH --nodes=1 --ntasks-per-node=1
#SBATCH --mem=288g
#SBATCH --export=NONE
#SBATCH --mail-user=alex_labossiere@uri.edu
#SBATCH --mail-type=BEGIN,END,FAIL

module load QIIME2/2024.2

rawdir=/data/mramseylab/raw_reads/2024_AL_SUPP

qiime tools export \
 --input-path $rawdir/pseudo-rep-seqs-v1v2-2024.qza \
 --output-path exported-taxa