#!/bin/bash
#SBATCH -t 4:00:00
#SBATCH --nodes=1 --ntasks-per-node=1
#SBATCH --mem=144g
#SBATCH --export=NONE
#SBATCH --mail-user=alex_labossiere@uri.edu
#SBATCH --mail-type=BEGIN,END,FAIL

module load QIIME2/2024.2

qiime feature-classifier fit-classifier-naive-bayes \
    --i-reference-reads silva-138.1-ssu-c97-seqs-29f-338r-uniq.qza \
    --i-reference-taxonomy silva-138.1-ssu-c97-tax-29f-338r-derep-uniq.qza \
    --o-classifier silva-138.1-ssu-c97-29f-338r-classifier.qza